DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl13b

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_775379.2 Gene:arl13b / 286784 ZFINID:ZDB-GENE-021217-3 Length:407 Species:Danio rerio


Alignment Length:182 Identity:61/182 - (33%)
Similarity:106/182 - (58%) Gaps:10/182 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LRKLRPNPEKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQ 71
            |::.| .|.::..::::||||||||..::.:..|....|.||.||:...:....|::.::|:||.
Zfish    12 LKRWR-EPARKVTLVMVGLDNAGKTATVRGIQGESPLDVAPTVGFSKVDLKQGKFEVTIFDLGGG 75

  Fly    72 WKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSA 136
            .:||..||||::.:..:::|:|.:|..|:.|....:.|:|...|:...|||:.|||||...||:.
Zfish    76 KRIRGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLANKQDQDGAMAE 140

  Fly   137 AEVAEKMSLVQLQGRT---WEIKACTAVDGTG------LKEGMDWVCKNMKK 179
            |::.|.:||.:|....   .:|:.|:||.|.|      :|.|::|:..|:.|
Zfish   141 ADIIETLSLEKLVNENKCLCQIEPCSAVLGYGKKVDKSIKNGLNWLLNNIAK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 59/177 (33%)
arl13bNP_775379.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..407
Blue background indicates that the domain is not in the aligned region.

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