DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and Arl5c

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_997114.1 Gene:Arl5c / 217151 MGIID:3028577 Length:179 Species:Mus musculus


Alignment Length:173 Identity:66/173 - (38%)
Similarity:105/173 - (60%) Gaps:1/173 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSLLRKLRPNPEKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNV 65
            ||.| :.:.:|....:|.:::::|||||||||||.|..:.::.....|.|.|::.:........:
Mouse     1 MGQL-IAKLMRIFGSQEHKVIIVGLDNAGKTTILYQFLTNEVVHTCSTIGSNVEEIVLRKTHFLM 64

  Fly    66 WDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDM 130
            ||:|||..:|..|..|::|.:.:|.|||.|||.||.....||::||....|:...|||||||||:
Mouse    65 WDLGGQEALRSTWDTYYSNAEFVILVIDSTDRNRLLTTREELYKMLAHEALQNASVLIFANKQDV 129

  Fly   131 PDAMSAAEVAEKMSLVQLQGRTWEIKACTAVDGTGLKEGMDWV 173
            .|:|:.||:::.::|..::...|.|:.|.|:.|.||..|:.|:
Mouse   130 KDSMTTAEISQFLTLSAIKDHPWHIQGCCALTGEGLPAGLQWM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 64/171 (37%)
Arl5cNP_997114.1 Arl5_Arl8 3..172 CDD:133353 63/169 (37%)

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