DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and warf-1

DIOPT Version :9

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_501242.1 Gene:warf-1 / 191609 WormBaseID:WBGene00000190 Length:179 Species:Caenorhabditis elegans


Alignment Length:165 Identity:80/165 - (48%)
Similarity:102/165 - (61%) Gaps:0/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PEKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYW 78
            |..|.|.|:||||.|||||||.:|...:.....||.|||:::|......|.|||:|||.|||..|
 Worm    14 PNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALW 78

  Fly    79 KNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKM 143
            |.||.||..|::|:|.:|..|:|||..|||.:|.:..|....:|:||||||||:|.|.||:.:.:
 Worm    79 KYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLL 143

  Fly   144 SLVQLQGRTWEIKACTAVDGTGLKEGMDWVCKNMK 178
            .|..|:.|.|.|....|..|.||.||:.||.|.||
 Worm   144 DLGSLKNREWFICGTNAHSGQGLYEGLMWVKKQMK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 77/161 (48%)
warf-1NP_501242.1 SAR 1..175 CDD:197556 77/160 (48%)
Arf_Arl 19..176 CDD:206644 75/156 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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