DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl-6

DIOPT Version :9

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_497993.1 Gene:arl-6 / 183311 WormBaseID:WBGene00000193 Length:190 Species:Caenorhabditis elegans


Alignment Length:184 Identity:60/184 - (32%)
Similarity:105/184 - (57%) Gaps:6/184 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSLLRKLRPNPEKEARILLLGLDNAGKTTILKQLASEDITT--VTPTAGFNIKSVAADGFKL 63
            ||..|.|..|....:|:..|:::||||:||||||.||.:.:..:  :.||.|..:.:.:......
 Worm     1 MGFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSF 65

  Fly    64 NVWDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNR---LKQVPVLIFA 125
            :.:|:.||.|.|..|::||.::..:|:|:|.:||.|:.....||. |:|:::   .:.:|::|.|
 Worm    66 HAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELM-MVMEHKDVVSRGIPIVILA 129

  Fly   126 NKQDMPDAMSAAEVAEKMSLVQLQGRTWEIKACTAVDGTGLKEGMDWVCKNMKK 179
            ||.|:|.||:|:::...:.|...:..||.|.:..|:.|.||.:.|..:...:.|
 Worm   130 NKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEITK 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 57/177 (32%)
arl-6NP_497993.1 small_GTP 17..173 CDD:272973 52/156 (33%)
Arl6 19..180 CDD:206722 53/161 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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