DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl-8

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_502791.1 Gene:arl-8 / 178405 WormBaseID:WBGene00000192 Length:185 Species:Caenorhabditis elegans


Alignment Length:169 Identity:52/169 - (30%)
Similarity:93/169 - (55%) Gaps:9/169 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKEARILLLGLDNAGKTTILKQLASEDIT-TVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYW 78
            ::|..:.|:||.|:||||.:..:||...| .:.||.|||::.:......:.:||||||.:.|..|
 Worm    18 KEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMW 82

  Fly    79 KNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKM 143
            :.|....:.:::::|..|..:|..:.:||.::|...:|..:|||:..||:|:|.|:...::.|:|
 Worm    83 ERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGALDERQLIERM 147

  Fly   144 SLVQLQGRTWEIKACTAVDGTGLKEGMD----WVCKNMK 178
            :|..:|.|    :.|........||.:|    |:..:.|
 Worm   148 NLSSIQNR----EICCYSISCKEKENIDITLQWLIDHSK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 51/165 (31%)
arl-8NP_502791.1 Arl10_like 22..180 CDD:206724 50/161 (31%)

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