DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arf-5

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_501336.1 Gene:arf-5 / 177595 WormBaseID:WBGene00000183 Length:180 Species:Caenorhabditis elegans


Alignment Length:181 Identity:84/181 - (46%)
Similarity:120/181 - (66%) Gaps:4/181 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLL--SLLRKLRPNPEKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKL 63
            |||.  ||..:|  ..:::.|||::|||.|||||||.:|...:|.|..||.|||:::|.......
 Worm     1 MGLTISSLFNRL--FGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF 63

  Fly    64 NVWDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQ 128
            .|||:|||.||||.|::||.||..||:|:|..|:.|:.|:..||.:||.::.|:...:|:|||||
 Worm    64 TVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRDATLLVFANKQ 128

  Fly   129 DMPDAMSAAEVAEKMSLVQLQGRTWEIKACTAVDGTGLKEGMDWVCKNMKK 179
            |:|:||:|||:.:|:.|..|:.|.|.|:|..|..|.||.||:||:...:.|
 Worm   129 DLPNAMTAAELTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQLSK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 81/174 (47%)
arf-5NP_501336.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..179 CDD:476819 83/179 (46%)

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