DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arf-1

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001367325.1 Gene:arf-1 / 175801 WormBaseID:WBGene00000182 Length:181 Species:Caenorhabditis elegans


Alignment Length:164 Identity:82/164 - (50%)
Similarity:112/164 - (68%) Gaps:0/164 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNVWDIGGQWKIRPYWK 79
            ::|.|||::|||.|||||||.:|...:|.|..||.|||:::|........|||:|||.||||.|:
 Worm    15 KREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWR 79

  Fly    80 NYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDMPDAMSAAEVAEKMS 144
            :||.||..||:|:|..||.|:.||..||..||.::.|:...:|:||||||:|.||:||||.:|:.
 Worm    80 HYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLG 144

  Fly   145 LVQLQGRTWEIKACTAVDGTGLKEGMDWVCKNMK 178
            |..|:.|:|.|:|..|..|.||.||:||:...:|
 Worm   145 LHSLRNRSWYIQATCATSGDGLYEGLDWLSNQLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 81/160 (51%)
arf-1NP_001367325.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..179 CDD:476819 82/164 (50%)

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