DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnd and Sar1

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:XP_312971.1 Gene:Sar1 / 1274012 VectorBaseID:AGAMI1_010375 Length:193 Species:Anopheles gambiae


Alignment Length:187 Identity:62/187 - (33%)
Similarity:91/187 - (48%) Gaps:19/187 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSLLRKLRPNPEKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSVAADGFKLNV 65
            :|.|.|.:       |..::|.||||||||||:|..|..:.:....||.....:.::....:...
Mosquito    11 LGYLGLWK-------KSGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGNMRFTT 68

  Fly    66 WDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEMLMDNRLKQVPVLIFANKQDM 130
            :|:||..:.|..||:||...|.::::||..||||..|:.:||..:|.|..|...||||..||.|.
Mosquito    69 FDLGGHTQARRVWKDYFPAVDAIVFLIDAWDRTRFTESKNELDSLLTDEALSNCPVLILGNKIDK 133

  Fly   131 PDAMSAAEVAEKMSLVQ------------LQGRTWEIKACTAVDGTGLKEGMDWVCK 175
            |.|.|..|:....:|.|            |.||..|:..|:.:...|..||..|:.:
Mosquito   134 PGAASEEELRNYFALFQLTTGKGKVPRSELPGRPLELFMCSVLKRQGYGEGFRWLAQ 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 61/185 (33%)
Sar1XP_312971.1 Sar1 2..192 CDD:206645 62/187 (33%)

Return to query results.
Submit another query.