DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dnd and Arl14

DIOPT Version :10

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001386692.1 Gene:Arl14 / 103690167 RGDID:9465124 Length:192 Species:Rattus norvegicus


Alignment Length:186 Identity:76/186 - (40%)
Similarity:110/186 - (59%) Gaps:13/186 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSLLRKLRPNP-EKEARILLLGLDNAGKTTILKQLASEDITTVTPTAGFNIKSV-AADGFKL 63
            |||||     ..|| :|:|.|||||||:|||:|:|.:|...:.....||.|||::.| ...|..|
  Rat     1 MGLLS-----SKNPKDKQAHILLLGLDSAGKSTLLYRLKFAETLATIPTIGFNVEMVQLQSGLAL 60

  Fly    64 NVWDIGGQWKIRPYWKNYFANTDVLIYVIDCTD-RTRLPEAGSELFEMLMDNRLKQVPVLIFANK 127
            .|||||||.|:|..|..|..|...|:||:||:: :.||.::..|...:|.:..:|..||:|.|||
  Rat    61 TVWDIGGQEKMRTVWDCYCENAHGLVYVVDCSEGQKRLEDSRKEFKHILKNEHIKNTPVVILANK 125

  Fly   128 QDMPDAMSAAEVAEKMSLVQL-QGRTWEIKACTAVDGTGLKEGM----DWVCKNMK 178
            ||:|.|:||.::.....:.:| ..|.|.::.|.||.|.||.:|.    ::|..::|
  Rat   126 QDLPGALSAEDITRMFKVKKLCSDRNWYVQPCCAVTGEGLDDGFRKLTEFVKSHLK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 73/180 (41%)
Arl14NP_001386692.1 ARLTS1 15..175 CDD:133356 65/159 (41%)

Return to query results.
Submit another query.