DRSC/TRiP Functional Genomics Resources

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Protein Alignment dnd and arl6

DIOPT Version :9

Sequence 1:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster
Sequence 2:XP_031752440.1 Gene:arl6 / 100170493 XenbaseID:XB-GENE-940504 Length:193 Species:Xenopus tropicalis


Alignment Length:177 Identity:65/177 - (36%)
Similarity:105/177 - (59%) Gaps:4/177 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLSLLRKLRPNPEKEARILLLGLDNAGKTTILKQL--ASEDITTVTPTAGFNIKSVAADGFKL 63
            |||...|.......:||..:|.|||||:|||||:.:|  |:.....:.||.||:|:.........
 Frog     1 MGLFDKLAGWLGLKKKEVHVLCLGLDNSGKTTIINKLKPANAQTQDIVPTIGFSIEKFKTSSLSF 65

  Fly    64 NVWDIGGQWKIRPYWKNYFANTDVLIYVIDCTDRTRLPEAGSELFEML--MDNRLKQVPVLIFAN 126
            .|:|:.||.:.|..|::|:.....:|:|||.:|:.|:..|..||..:|  .|.:.:::|||.|||
 Frog    66 TVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELETLLNHADIKHRRMPVLFFAN 130

  Fly   127 KQDMPDAMSAAEVAEKMSLVQLQGRTWEIKACTAVDGTGLKEGMDWV 173
            |.|:.|::|:.:|::.:||..::.:.|.|.|...:.|.||:||:||:
 Frog   131 KMDLRDSLSSVKVSQLLSLEHIKDKPWHICASDGLTGEGLQEGVDWL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dndNP_650995.1 Arl3 3..176 CDD:206721 63/175 (36%)
arl6XP_031752440.1 Arl6 19..180 CDD:206722 59/159 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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