DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and ARFD1A

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_563652.1 Gene:ARFD1A / 839230 AraportID:AT1G02440 Length:190 Species:Arabidopsis thaliana


Alignment Length:186 Identity:45/186 - (24%)
Similarity:86/186 - (46%) Gaps:45/186 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QKSCLLILGLDNAGKS----------TLTDRLAEI-FNGES---KESNNQVSEWSFTINNFRVQL 69
            :::.:::.||...|||          |||..:..: .|.||   |:||              :..
plant    16 EEARIVLFGLGGTGKSSIMHKFKTGETLTTTMPTVGLNVESVKYKDSN--------------LCF 66

  Fly    70 WDINGELKNRQ------IWPKYYKKVNVLIFVLDSTDALRLSEAR---CVLCDVLMHQELDNAPL 125
            |::.|:    |      :|..:::::..|:.|:|||...::.|.:   .|:.|.:.....||||:
plant    67 WEMGGQ----QCYMWFPLWKHWFQEIAGLVLVVDSTGRDQIEETKDFLNVVIDEIQGSVPDNAPV 127

  Fly   126 LIVSNKKDASGSLSMSTV---IDLMGLYRLT-GRDWTFEECSMRTGSGVQEIVNWI 177
            |:..||.:..|::|.|.:   :||..|.:.. .|:|..:.....:|.|:.|.::|:
plant   128 LVYGNKHEVPGAMSASEISNKLDLTSLRKKNWQRNWHVQSSCAFSGDGLHEGLDWL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 45/183 (25%)
ARFD1ANP_563652.1 Arf_Arl 19..186 CDD:206644 45/183 (25%)

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