DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and ARFA1F

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_172533.2 Gene:ARFA1F / 837606 AraportID:AT1G10630 Length:181 Species:Arabidopsis thaliana


Alignment Length:186 Identity:62/186 - (33%)
Similarity:99/186 - (53%) Gaps:22/186 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VSFIKKILPAGSQKSC-LLILGLDNAGKSTLTD--RLAEI--------FNGESKESNNQVSEWSF 60
            :||.|......::|.. :|::|||.|||:|:..  :|.||        ||.|:.|..|    .||
plant     3 LSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN----ISF 63

  Fly    61 TINNFRVQLWDINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPL 125
            |:       ||:.|:.|.|.:|..|::....||||:||.|..|:.|||..|..:|...||.:|.|
plant    64 TV-------WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVL 121

  Fly   126 LIVSNKKDASGSLSMSTVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKI 181
            |:.:||:|...:::.:.:.|.:||:.|..|.|..:.....:|.|:.|.::|::..|
plant   122 LVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 57/168 (34%)
ARFA1FNP_172533.2 PLN00223 1..181 CDD:165788 62/186 (33%)

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