DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17819 and ARLA1C

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_190556.2 Gene:ARLA1C / 824149 AraportID:AT3G49870 Length:184 Species:Arabidopsis thaliana


Alignment Length:161 Identity:50/161 - (31%)
Similarity:91/161 - (56%) Gaps:4/161 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQV--SEWSFTINNFRVQLWDINGELKNRQI 81
            |:..|.::||.||||::|.:.:|.  .|.|::....|  :....|..|..::|||:.|:.:.|.:
plant    18 QEMELSLIGLQNAGKTSLVNVVAT--GGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSM 80

  Fly    82 WPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTVIDL 146
            |.:|.:.|:.:::|:|:.|...||.::..|.|:|....|:..|||::.||.|..|:||...:.|.
plant    81 WERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKIDKPGALSKEALTDE 145

  Fly   147 MGLYRLTGRDWTFEECSMRTGSGVQEIVNWI 177
            |||..||.|:......|.:..:.:.::::|:
plant   146 MGLTSLTDREVCCFMISCKNSTNIDQVIDWL 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 49/158 (31%)
ARLA1CNP_190556.2 Arl10_like 21..179 CDD:206724 49/158 (31%)

Return to query results.
Submit another query.