DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and ARLA1B

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_190555.2 Gene:ARLA1B / 824148 AraportID:AT3G49860 Length:176 Species:Arabidopsis thaliana


Alignment Length:168 Identity:49/168 - (29%)
Similarity:94/168 - (55%) Gaps:13/168 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSF-----TINNFRVQLWDINGELKNRQIW 82
            |.::||.|:||::|.:.:|   .||..|  :.:....|     |..|..::|||:.|:.:.|.:|
plant    14 LSLVGLQNSGKTSLVNVVA---TGEYSE--DMIPTVGFNMRKVTKENVAIRLWDLGGQPRFRCMW 73

  Fly    83 PKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTVIDLM 147
            .:|.:.|:::::|:|:.|...||.:|..|.|:|.:..|...|||::.||.|..|:||...:.:.|
plant    74 ERYCRAVSMIVYVVDAADTENLSVSRSELHDLLSNASLIGIPLLVLGNKIDIHGALSKEALTEEM 138

  Fly   148 GLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINNNR 185
            ||..:|.|:......|.:..:.:.::.:|:   :|:::
plant   139 GLSSVTSREVCCLMISCKNPTTIDQLTDWL---VNHSK 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 48/161 (30%)
ARLA1BNP_190555.2 Arl10_like 13..171 CDD:206724 48/164 (29%)

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