DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and ARF1A1C

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_182239.1 Gene:ARF1A1C / 819330 AraportID:AT2G47170 Length:181 Species:Arabidopsis thaliana


Alignment Length:169 Identity:58/169 - (34%)
Similarity:92/169 - (54%) Gaps:21/169 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTD--RLAEI--------FNGESKESNNQVSEWSFTINNFRVQLWDINGELK 77
            :|::|||.|||:|:..  :|.||        ||.|:.|..|    .|||:       ||:.|:.|
plant    20 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN----ISFTV-------WDVGGQDK 73

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .|.:|..|::....||||:||.|..|:.|||..|..:|...||.:|.||:.:||:|...:::.:.
plant    74 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAE 138

  Fly   143 VIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKI 181
            :.|.:||:.|..|.|..:.....:|.|:.|.::|::..|
plant   139 ITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 57/166 (34%)
ARF1A1CNP_182239.1 PLN00223 1..181 CDD:165788 58/169 (34%)

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