DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and Arl4d

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_079680.1 Gene:Arl4d / 80981 MGIID:1933155 Length:201 Species:Mus musculus


Alignment Length:175 Identity:53/175 - (30%)
Similarity:87/175 - (49%) Gaps:17/175 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRV----------QLWDINGELK 77
            ::::|||:|||::|..||      :.||....|....|.....||          |:||:.|:.|
Mouse    24 VVVIGLDSAGKTSLLYRL------KFKEFVQSVPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEK 82

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .|.:|..|.::.:.|:||:||.:..||.|||..|..:....:....|:|:::||:|..|:||.:.
Mouse    83 LRPLWRSYTRRTDGLVFVVDSAETERLEEARMELHRISKASDNQGVPVLVLANKQDQPGALSAAE 147

  Fly   143 VIDLMGLYRLTGRDWT-FEECSMRTGSGVQEIVNWINEKINNNRK 186
            |...:.:..|.....| .:.||...|.|:|..:..:.|.|...:|
Mouse   148 VEKRLAVRELAAATLTHVQGCSAVDGLGLQPGLEHLYEMILKRKK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 50/167 (30%)
Arl4dNP_079680.1 Arl4_Arl7 19..201 CDD:206719 53/175 (30%)

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