DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl3b

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001038373.1 Gene:arl3b / 797451 ZFINID:ZDB-GENE-030131-7518 Length:182 Species:Danio rerio


Alignment Length:192 Identity:62/192 - (32%)
Similarity:103/192 - (53%) Gaps:21/192 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPVSFIKKILPAGSQKSCLLILGLDNAGKSTLTDRLA----------EIFNGESKESNNQVSEWS 59
            |.:|.::|:.....|:..:|:|||||.||:||..:||          :.||.:|.:|        
Zfish     2 GLLSILRKLKSTPDQEVRILLLGLDNGGKTTLLKQLASEDITHITPTQGFNIKSVQS-------- 58

  Fly    60 FTINNFRVQLWDINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAP 124
               ..|::.:|||.|:.|.|..|..|::..:|||:|:||.|..|..|....|.::|..::|...|
Zfish    59 ---QGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVP 120

  Fly   125 LLIVSNKKDASGSLSMSTVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINNNRK 186
            :|:.:||:|...:...|.:.:.:.|:.:..|.|..:.||..||.|||:.:||:.:.:|..||
Zfish   121 VLVFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKSVNAKRK 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 55/167 (33%)
Ras 23..183 CDD:278499 55/169 (33%)
arl3bNP_001038373.1 Arl3 3..175 CDD:206721 58/182 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
21.870

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