DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl13a

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_957112.2 Gene:arl13a / 793658 ZFINID:ZDB-GENE-040426-1790 Length:434 Species:Danio rerio


Alignment Length:173 Identity:49/173 - (28%)
Similarity:93/173 - (53%) Gaps:4/173 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SFIKKILPAGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRVQLWDI 72
            |::.| |....:|..:|::|||.|||::....:..:..|:...::..| .....:.|:.|.:.||
Zfish    35 SWVSK-LQQPLRKITVLVVGLDKAGKTSCVRGMLRVPPGDVGPTHGCV-RTELRLENYLVNILDI 97

  Fly    73 NGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGS 137
            .|.|:.|..|.::|.:.:.:|||:||:|..|:.|.:..|.|:|.|..:...|||:::||:|...:
Zfish    98 GGGLEVRGSWREHYGEAHGIIFVVDSSDRQRMKEVKETLVDLLKHPRVAGKPLLVLANKQDKMNA 162

  Fly   138 LSMSTVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEK 180
            |..:.:|:::.|.||..:..:.  |.:...|...::..|.:.|
Zfish   163 LLGNELIEILSLERLVNQSRSL--CHIEPCSASMDLRRWSDRK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 44/157 (28%)
arl13aNP_957112.2 Arl2l1_Arl13_like 48..214 CDD:133361 45/159 (28%)

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