DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl8a

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001186949.1 Gene:arl8a / 567222 ZFINID:ZDB-GENE-030131-5025 Length:186 Species:Danio rerio


Alignment Length:168 Identity:40/168 - (23%)
Similarity:85/168 - (50%) Gaps:10/168 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSF-----TINNFRVQLWDINGELKNRQIW 82
            |.::||..:||:|..:.:|   :|:..|  :.:....|     |..|..::||||.|:.:.|.:|
Zfish    23 LTLVGLQYSGKTTFVNVIA---SGQFSE--DMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMW 82

  Fly    83 PKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTVIDLM 147
            .:|.:.|:.:::::|:.|..::..::..|.::|...:|...|:|::.||:|..|:|....:|:.|
Zfish    83 ERYCRGVSAIVYMVDAADPEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIERM 147

  Fly   148 GLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINNNR 185
            .|..:..|:......|.:....:...:.|:.:.....|
Zfish   148 NLSAIQDREICCYSISCKEKDNIDITLQWLIQHSRTRR 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 39/161 (24%)
arl8aNP_001186949.1 Arl10_like 22..180 CDD:206724 39/161 (24%)

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