DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17819 and Arl2

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_062696.2 Gene:Arl2 / 56327 MGIID:1928393 Length:184 Species:Mus musculus


Alignment Length:187 Identity:57/187 - (30%)
Similarity:100/187 - (53%) Gaps:18/187 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPVSFIKKILPAGSQKS---CLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTI---- 62
            |.::.:||:    .||.   .||:||||||||:|:..:    ||||..::.:..  ..|.|    
Mouse     2 GLLTILKKM----KQKERELRLLMLGLDNAGKTTILKK----FNGEDVDTISPT--LGFNIKTLE 56

  Fly    63 -NNFRVQLWDINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLL 126
             ..|::.:||:.|:...|..|..|::..:.||:|:||.|..|:.:.:..|..:|:.:.|..|.||
Mouse    57 HRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLL 121

  Fly   127 IVSNKKDASGSLSMSTVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINN 183
            |.:||:|..|:||.:.:.:.:.|..:....|..:.||..||..:...::|:.:.|::
Mouse   122 IFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISS 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 51/162 (31%)
Arl2NP_062696.2 Arl2 3..175 CDD:206720 55/181 (30%)

Return to query results.
Submit another query.