DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl4ca

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001017749.1 Gene:arl4ca / 550444 ZFINID:ZDB-GENE-050417-265 Length:192 Species:Danio rerio


Alignment Length:182 Identity:56/182 - (30%)
Similarity:87/182 - (47%) Gaps:17/182 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSF----------TINNFRVQLW 70
            |..|...:::||||:|||:|:..||.  ||    |..|.|....|          |........|
Zfish     9 AAFQSLHIVMLGLDSAGKTTVLYRLK--FN----EFVNTVPTIGFNTEKIKLSNGTAKGISCHFW 67

  Fly    71 DINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDAS 135
            |:.|:.|.|.:|..|.:..:.:|:|:||.|..||.||:..|..|....|....|||:::||:|..
Zfish    68 DVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLP 132

  Fly   136 GSLSMSTVIDLMGLYRLT-GRDWTFEECSMRTGSGVQEIVNWINEKINNNRK 186
            .||::|.:...:.|:.|: ...:..:......|.|:.|.::.:.|.|...||
Zfish   133 KSLTVSEIEKHLALHELSPSTTYHVQPACAIIGEGLHEGMDKLYEMIVKRRK 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 50/168 (30%)
arl4caNP_001017749.1 Arl4_Arl7 11..192 CDD:206719 55/180 (31%)

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