DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl4ca

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001017749.1 Gene:arl4ca / 550444 ZFINID:ZDB-GENE-050417-265 Length:192 Species:Danio rerio


Alignment Length:182 Identity:56/182 - (30%)
Similarity:87/182 - (47%) Gaps:17/182 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSF----------TINNFRVQLW 70
            |..|...:::||||:|||:|:..||.  ||    |..|.|....|          |........|
Zfish     9 AAFQSLHIVMLGLDSAGKTTVLYRLK--FN----EFVNTVPTIGFNTEKIKLSNGTAKGISCHFW 67

  Fly    71 DINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDAS 135
            |:.|:.|.|.:|..|.:..:.:|:|:||.|..||.||:..|..|....|....|||:::||:|..
Zfish    68 DVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLP 132

  Fly   136 GSLSMSTVIDLMGLYRLT-GRDWTFEECSMRTGSGVQEIVNWINEKINNNRK 186
            .||::|.:...:.|:.|: ...:..:......|.|:.|.::.:.|.|...||
Zfish   133 KSLTVSEIEKHLALHELSPSTTYHVQPACAIIGEGLHEGMDKLYEMIVKRRK 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 50/168 (30%)
Ras 23..183 CDD:278499 52/170 (31%)
arl4caNP_001017749.1 Arl4_Arl7 11..192 CDD:206719 55/180 (31%)
small_GTP 16..181 CDD:272973 52/170 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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