DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and sar1b

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001015871.1 Gene:sar1b / 548588 XenbaseID:XB-GENE-944209 Length:198 Species:Xenopus tropicalis


Alignment Length:192 Identity:57/192 - (29%)
Similarity:91/192 - (47%) Gaps:19/192 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FYGPVSFIKKILPAGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRV 67
            |.|.:.|:......|.    |:.||||||||:||...|.:...|:...:.:..|| ..||.....
 Frog    12 FSGVLQFLGLYKKTGK----LVFLGLDNAGKTTLLQMLKDGRMGQYVPTLHPTSE-ELTIAGMTF 71

  Fly    68 QLWDINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQE-LDNAPLLIVSNK 131
            ..:|:.|..:.|::|..|...:|.::|::|..|..||||::..| |.||..| :.|.|:|::.||
 Frog    72 TTFDLGGHTQARRVWKNYLPAINGIVFLIDCADHDRLSESKREL-DALMADETIANVPILLLGNK 135

  Fly   132 KDASGSLSMSTVIDLMGLY------------RLTGRDWTFEECSMRTGSGVQEIVNWINEKI 181
            .|...::|...::.|.|:|            :|..|......||:....|..|...|:::.|
 Frog   136 IDRPEAISEERLLHLFGIYGQTTGKGKVPQKQLANRPLEVFMCSILKRQGYGEGFRWLSQYI 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 52/170 (31%)
sar1bNP_001015871.1 Sar1 3..197 CDD:206645 56/190 (29%)

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