DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17819 and arfrp1

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_005166227.1 Gene:arfrp1 / 503602 ZFINID:ZDB-GENE-050227-14 Length:201 Species:Danio rerio


Alignment Length:177 Identity:53/177 - (29%)
Similarity:95/177 - (53%) Gaps:19/177 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFT---------INNFRVQLWDINGELK 77
            |:||||||||||:|..::....|:...|..|  :|:.:.|         :...|:..||:.|:.:
Zfish    19 CILILGLDNAGKTTFLEQTKTRFSKNYKGMN--LSKITTTVGLNIGTIDVGKARLMFWDLGGQEE 81

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .:.:|.|||.:.:.:|:|:||||..||.|::.....::..:.|:..|||:::||:|....||   
Zfish    82 LQSLWDKYYAESHGVIYVIDSTDEERLGESKNAFEKMISSEALEGVPLLVLANKQDVENCLS--- 143

  Fly   143 VIDLMGLY-----RLTGRDWTFEECSMRTGSGVQEIVNWINEKINNN 184
            |.|:...:     ::..||...:.|:..:|.||.:.:.|:.:.:..|
Zfish   144 VPDIKTAFSDCAPKIGKRDCLVQPCAALSGQGVNDGIEWMVKCVIRN 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 52/171 (30%)
arfrp1XP_005166227.1 Arfrp1 19..186 CDD:206725 52/171 (30%)

Return to query results.
Submit another query.