DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and Arl8a

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001102541.1 Gene:Arl8a / 498234 RGDID:1565940 Length:186 Species:Rattus norvegicus


Alignment Length:168 Identity:40/168 - (23%)
Similarity:87/168 - (51%) Gaps:10/168 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSF-----TINNFRVQLWDINGELKNRQIW 82
            |.::||..:||:|..:.:|   :|:..|  :.:....|     |..|..::||||.|:.:.|.:|
  Rat    23 LTLVGLQYSGKTTFVNVIA---SGQFNE--DMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMW 82

  Fly    83 PKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTVIDLM 147
            .:|.:.|:.:::::|:.|..::..::..|.::|...:|...|:|::.||:|.:|:|....:|:.|
  Rat    83 ERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLAGALDEKELIEKM 147

  Fly   148 GLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINNNR 185
            .|..:..|:......|.:....:...:.|:.:...:.|
  Rat   148 NLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKSRR 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 39/161 (24%)
Arl8aNP_001102541.1 Arl10_like 22..180 CDD:206724 39/161 (24%)

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