DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl5b

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001006744.1 Gene:arl5b / 448415 XenbaseID:XB-GENE-996906 Length:179 Species:Xenopus tropicalis


Alignment Length:164 Identity:53/164 - (32%)
Similarity:83/164 - (50%) Gaps:9/164 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SQKSCLLILGLDNAGKSTLTDRLAEIFNGE----SKESNNQVSEWSFTINNFRVQLWDINGELKN 78
            :|:..::|:|||||||:||   |.:....|    |....:.|.|  ..:.|....:|||.|:...
 Frog    14 NQEHKVIIVGLDNAGKTTL---LYQFLMNEVVHTSPTIGSNVEE--IVVKNTHFLMWDIGGQESL 73

  Fly    79 RQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTV 143
            |..|..||.....:|.|:||||..|||..:..|..:|.|::|..|.:||.:||:|..|.:|.:.:
 Frog    74 RSSWNTYYSNTEFIILVVDSTDRERLSITKEELYRMLAHEDLRKAAVLIFANKQDIKGCMSAADI 138

  Fly   144 IDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWI 177
            ...:.|..:....|..:.|...||.|:.:.:.|:
 Frog   139 SKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 52/160 (33%)
Ras 23..183 CDD:278499 52/159 (33%)
arl5bNP_001006744.1 Arl5_Arl8 3..175 CDD:133353 53/164 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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