DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl4a

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001006711.1 Gene:arl4a / 448350 XenbaseID:XB-GENE-5783083 Length:200 Species:Xenopus tropicalis


Alignment Length:175 Identity:57/175 - (32%)
Similarity:85/175 - (48%) Gaps:17/175 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRVQL----------WDINGELK 77
            :.|||||.|||:|:..||.  ||    |..|.|....|.....:|.|          ||:.|:.|
 Frog    23 IAILGLDCAGKTTVLYRLQ--FN----EFVNTVPTKGFNAEKIKVSLGNSKTVTFHFWDVGGQEK 81

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .|.:|..|.:..:.::||:||.||.|:.||:..|..:....|....|:|||:||:|...||::|.
 Frog    82 LRPLWKSYTRCTDGIVFVVDSVDAERMEEAKTELHKITKISENQGVPVLIVANKQDLRNSLTLSE 146

  Fly   143 VIDLMGLYRL-TGRDWTFEECSMRTGSGVQEIVNWINEKINNNRK 186
            :..|:.|... :...|..:......|.|::|.:..:.|.|...||
 Frog   147 IEKLLALNEFGSSTPWHLQATCAIIGDGLREGIEKLYEMIIKRRK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 53/167 (32%)
arl4aNP_001006711.1 Arl4_Arl7 18..200 CDD:206719 57/175 (33%)

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