DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arf3a

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001003441.1 Gene:arf3a / 445047 ZFINID:ZDB-GENE-040801-176 Length:181 Species:Danio rerio


Alignment Length:188 Identity:61/188 - (32%)
Similarity:104/188 - (55%) Gaps:23/188 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SFIKKILPAGSQKSCLLILGLDNAGKSTLTD--RLAEI--------FNGESKESNNQVSEWSFTI 62
            :.:|.::  |.::..:|::|||.|||:|:..  :|.||        ||.|:.|..|    .|||:
Zfish     7 NLLKSLI--GKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN----ISFTV 65

  Fly    63 NNFRVQLWDINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLI 127
                   ||:.|:.|.|.:|..|::....||||:||.|..|::|||..|..:|...||.:|.|||
Zfish    66 -------WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLI 123

  Fly   128 VSNKKDASGSLSMSTVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINNNR 185
            .:||:|...:::.:.:.|.:||:.|..|:|..:.....:|.|:.|.::|:..::.|.:
Zfish   124 FANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 58/167 (35%)
Ras 23..183 CDD:278499 58/169 (34%)
arf3aNP_001003441.1 P-loop_NTPase 5..179 CDD:422963 60/184 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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