DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and Arl4

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster


Alignment Length:183 Identity:49/183 - (26%)
Similarity:83/183 - (45%) Gaps:25/183 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LPAGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRVQL--------- 69
            ||:......:::||||:|||:|...||      :..:..|.|....|.....:..|         
  Fly    19 LPSQVATLHVVMLGLDSAGKTTALYRL------KFDQYLNTVPTIGFNCEKVQCTLGKAKGVHFL 77

  Fly    70 -WDINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKD 133
             ||:.|:.|.|.:|..|.:..:.::||:||.|..|:.||:..|.......:....|:||::||:|
  Fly    78 VWDVGGQEKLRPLWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQD 142

  Fly   134 ---ASGSLSMSTVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINN 183
               |.|::.:..::.|..||.      .....||.:.|.....:|.|..:::|
  Fly   143 LPNACGAMELEKLLGLNELYN------PVPNISMPSSSDSSPTINLIGCRVSN 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 46/170 (27%)
Ras 23..183 CDD:278499 46/172 (27%)
Arl4NP_001245408.1 P-loop_NTPase 24..311 CDD:304359 47/178 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455833
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11711
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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