DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and Arl5

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster


Alignment Length:173 Identity:56/173 - (32%)
Similarity:90/173 - (52%) Gaps:13/173 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GSQKSCLLILGLDNAGKSTLTDRLAEIFNGE----SKESNNQVSE--WSFTINNFRVQLWDINGE 75
            |:::..|:::|||||||:|:   |.:....|    |....:.|.|  |    .|....:||:.|:
  Fly    13 GNEEHKLVMVGLDNAGKTTI---LYQFLMNEVVHTSPTIGSNVEEVVW----RNIHFLVWDLGGQ 70

  Fly    76 LKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSM 140
            ...|..|..||....::|.|:||||..||:..|..|..:|.|::|..|.||:.:||:|..||:|.
  Fly    71 QSLRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANKQDLKGSMSA 135

  Fly   141 STVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINN 183
            :.:...:.|..:....|..:.|...||.|:.:.:.||.::|.|
  Fly   136 AEISRQLDLTSIKKHQWHIQACCALTGEGLYQGLEWIVQRIKN 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 53/163 (33%)
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 54/168 (32%)

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