DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl4ab

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_956612.1 Gene:arl4ab / 338267 ZFINID:ZDB-GENE-030219-167 Length:201 Species:Danio rerio


Alignment Length:190 Identity:63/190 - (33%)
Similarity:93/190 - (48%) Gaps:19/190 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FIKKILPAGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRVQL---- 69
            ||...||: .|...::|||||.|||:|:..||.  ||    |..|.|....|.....:|.|    
Zfish    10 FIFPCLPS-FQALHIVILGLDCAGKTTVLYRLR--FN----EFVNTVPTKGFNTEKIKVNLGPKS 67

  Fly    70 -------WDINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLI 127
                   ||:.|:.|.|.:|..|.:..:.|:||:||.||.|:.||:..|..:...||....|:|:
Zfish    68 RTATFHFWDVGGQEKLRPLWRSYTRCADGLVFVVDSVDAERMEEAKTELHKITRLQENLGVPVLV 132

  Fly   128 VSNKKDASGSLSMSTVIDLMGLYRL-TGRDWTFEECSMRTGSGVQEIVNWINEKINNNRK 186
            |:||:|...:|.:|.|..::.|..| :...|..:......|.|:||.:..::..|...||
Zfish   133 VANKQDLRSALPLSEVEQMLALNELGSHTPWHLQPACAIIGEGLQEGLERLHTMIIKRRK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 55/169 (33%)
Ras 23..183 CDD:278499 56/171 (33%)
arl4abNP_956612.1 Arl4_Arl7 18..201 CDD:206719 59/181 (33%)
Gem1 23..>148 CDD:224025 47/130 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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