DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arf6a

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_956287.1 Gene:arf6a / 336063 ZFINID:ZDB-GENE-030131-8007 Length:175 Species:Danio rerio


Alignment Length:170 Identity:54/170 - (31%)
Similarity:94/170 - (55%) Gaps:7/170 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IKKILPAGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQV--SEWSFTINNFRVQLWDI 72
            :.||.  |:::..:|:||||.|||:|:   |.::..|:|..:...|  :..:.|..|.:..:||:
Zfish     5 LSKIF--GNKEMRILMLGLDAAGKTTI---LYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDV 64

  Fly    73 NGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGS 137
            .|:.|.|.:|..||.....||||:|..|..|:.|||..|..::..:|:.:|.:||.:||:|...:
Zfish    65 GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA 129

  Fly   138 LSMSTVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWI 177
            :....:.:.:||.|:..|:|..:.....||.|:.|.:.|:
Zfish   130 MKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 51/158 (32%)
arf6aNP_956287.1 ARF 1..175 CDD:128474 54/170 (32%)

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