DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17819 and arl8

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_956118.1 Gene:arl8 / 327551 ZFINID:ZDB-GENE-030131-5762 Length:179 Species:Danio rerio


Alignment Length:167 Identity:50/167 - (29%)
Similarity:83/167 - (49%) Gaps:9/167 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SQKSCLLILGLDNAGKSTLTDRLAEIFNGE----SKESNNQVSEWSFTINNFRVQLWDINGELKN 78
            :|:..::|:|||||||:|:   |.:....|    |....:.|.|  ..:......:|||.|:...
Zfish    14 NQEHKVIIVGLDNAGKTTI---LYQFLMNEVVHTSPTIGSNVEE--IVVKKTHFLMWDIGGQESL 73

  Fly    79 RQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTV 143
            |..|..||.....:|.|:||||..||:.::..|..:|.|::|..|.:||.:||:|..|.:|.:.:
Zfish    74 RSSWNTYYSNTEFIILVVDSTDRERLAISKEELYRMLAHEDLRKAAVLIFANKQDMKGCMSAAEI 138

  Fly   144 IDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEK 180
            ...:.|..:....|..:.|...||.|:...:.|:..:
Zfish   139 YKYLTLSSIKDHPWHIQSCCALTGEGLCRGLEWMTSR 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 49/161 (30%)
arl8NP_956118.1 Arl5_Arl8 3..175 CDD:133353 50/165 (30%)

Return to query results.
Submit another query.