DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl8

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_956118.1 Gene:arl8 / 327551 ZFINID:ZDB-GENE-030131-5762 Length:179 Species:Danio rerio


Alignment Length:167 Identity:50/167 - (29%)
Similarity:83/167 - (49%) Gaps:9/167 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SQKSCLLILGLDNAGKSTLTDRLAEIFNGE----SKESNNQVSEWSFTINNFRVQLWDINGELKN 78
            :|:..::|:|||||||:|:   |.:....|    |....:.|.|  ..:......:|||.|:...
Zfish    14 NQEHKVIIVGLDNAGKTTI---LYQFLMNEVVHTSPTIGSNVEE--IVVKKTHFLMWDIGGQESL 73

  Fly    79 RQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTV 143
            |..|..||.....:|.|:||||..||:.::..|..:|.|::|..|.:||.:||:|..|.:|.:.:
Zfish    74 RSSWNTYYSNTEFIILVVDSTDRERLAISKEELYRMLAHEDLRKAAVLIFANKQDMKGCMSAAEI 138

  Fly   144 IDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEK 180
            ...:.|..:....|..:.|...||.|:...:.|:..:
Zfish   139 YKYLTLSSIKDHPWHIQSCCALTGEGLCRGLEWMTSR 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 49/161 (30%)
Ras 23..183 CDD:278499 49/162 (30%)
arl8NP_956118.1 Arl5_Arl8 3..175 CDD:133353 50/165 (30%)
SAR 8..173 CDD:197556 50/163 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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