DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl11

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_955987.1 Gene:arl11 / 324689 ZFINID:ZDB-GENE-030131-3410 Length:176 Species:Danio rerio


Alignment Length:160 Identity:53/160 - (33%)
Similarity:83/160 - (51%) Gaps:20/160 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDR-LAEI---------FNGESKESNNQVSEWSFTINNFRVQLWDINGELK 77
            :||:|||:||||||..| |..:         ||..:.:.|.:.|          :.:|||.|:..
Zfish    15 VLIMGLDSAGKSTLMYRQLHGVIMQTSPTVGFNVATLQLNKKTS----------LTVWDIGGQDT 69

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .|..|..|.:...||:||:||:|..|:.||:..|..:|..:.|...||::::||||...::::..
Zfish    70 MRPNWKYYLEGCKVLVFVVDSSDYARIGEAQKALKKILHDEHLKGVPLMVLANKKDLPNTMTIRE 134

  Fly   143 VIDLMGLYRLTGRDWTFEECSMRTGSGVQE 172
            |...:.|...|.|.|..:.||...|.|:|:
Zfish   135 VSTKLDLDTYTDRQWEIQACSAVKGLGLQQ 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 53/160 (33%)
arl11NP_955987.1 ARLTS1 14..172 CDD:133356 53/160 (33%)

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