DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl4d

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_955938.1 Gene:arl4d / 323573 ZFINID:ZDB-GENE-030131-2293 Length:200 Species:Danio rerio


Alignment Length:160 Identity:44/160 - (27%)
Similarity:82/160 - (51%) Gaps:17/160 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRV----------QLWDINGELK 77
            ::::|||::||::|..||      :.||....:....|.....:|          |.||:.|:.|
Zfish    23 VVVIGLDSSGKTSLLYRL------KLKEFVETIPTKGFNTEKIKVPVGNGRAITFQAWDVGGQEK 81

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .|.:|..|.::.:.::||:|||:..|:.||:..|..:....|....|:|:::||:|...:|.:|.
Zfish    82 LRPLWKSYTRRTDGMVFVVDSTEVERMEEAKVELHKITRTSENQGVPVLVLANKQDLPVALPVSD 146

  Fly   143 VIDLMGLYRLTGRD-WTFEECSMRTGSGVQ 171
            |..::.::.|:... ...:.||...|.|:|
Zfish   147 VEKVLAVHELSASTLHHVQGCSAVDGQGLQ 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 44/160 (28%)
Ras 23..183 CDD:278499 44/160 (28%)
arl4dNP_955938.1 Arl4_Arl7 18..200 CDD:206719 44/160 (28%)
small_GTP 23..188 CDD:272973 44/160 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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