DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and Arl10

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_006253691.2 Gene:Arl10 / 306767 RGDID:1303298 Length:243 Species:Rattus norvegicus


Alignment Length:164 Identity:56/164 - (34%)
Similarity:80/164 - (48%) Gaps:28/164 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFT-----INNFRVQLWDINGELKNRQIW 82
            :|:||||.:||||....||    |:.....: |..|.|.     ..||.|.|.:|.|....|..|
  Rat    79 VLVLGLDGSGKSTFLRMLA----GKPPVEGH-VPTWGFNSVRLPTKNFEVDLLEIGGSQNLRFYW 138

  Fly    83 PKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELD-------NAPLLIVSNKKDASGSLSM 140
            .::..:|:||:|::||||.|||..||         |||.       :.|::||:||:|.||::||
  Rat   139 KEFVNEVDVLVFMVDSTDRLRLPWAR---------QELQKLLDKDPDLPVVIVANKQDLSGAMSM 194

  Fly   141 STVIDLMGLYRLTGRDWTF--EECSMRTGSGVQE 172
            ..:...:||.....:...|  .......|||.:|
  Rat   195 VELQQELGLLASDNQREVFLLAASIAPAGSGFEE 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 56/164 (34%)
Ras 23..183 CDD:278499 56/164 (34%)
Arl10XP_006253691.2 P-loop_NTPase 78..236 CDD:422963 56/164 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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