DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl13b

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_775379.2 Gene:arl13b / 286784 ZFINID:ZDB-GENE-021217-3 Length:407 Species:Danio rerio


Alignment Length:181 Identity:57/181 - (31%)
Similarity:93/181 - (51%) Gaps:19/181 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQV------SEWSFTINNFRVQLWDINGEL 76
            ::|..|:::||||||| |.|.|      |...||...|      |:.......|.|.::|:.|..
Zfish    19 ARKVTLVMVGLDNAGK-TATVR------GIQGESPLDVAPTVGFSKVDLKQGKFEVTIFDLGGGK 76

  Fly    77 KNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMS 141
            :.|.||..||.:...::||:||:|..|:.|.|..:.:||.|..:...|:|:::||:|..|:::.:
Zfish    77 RIRGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLANKQDQDGAMAEA 141

  Fly   142 TVIDLMGLYRLTGRD---WTFEECSMRTGSGV---QEIVNWINEKINNNRK 186
            .:|:.:.|.:|...:   ...|.||...|.|.   :.|.|.:|..:||..|
Zfish   142 DIIETLSLEKLVNENKCLCQIEPCSAVLGYGKKVDKSIKNGLNWLLNNIAK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 53/169 (31%)
arl13bNP_775379.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..407
Blue background indicates that the domain is not in the aligned region.

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