DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17819 and warf-1

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_501242.1 Gene:warf-1 / 191609 WormBaseID:WBGene00000190 Length:179 Species:Caenorhabditis elegans


Alignment Length:163 Identity:49/163 - (30%)
Similarity:86/163 - (52%) Gaps:11/163 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRVQ-----LWDINGELKNRQIWP 83
            |:||||.|||:|:..:|      :..|:.|.:....|.:.....|     :||:.|:.|.|.:|.
 Worm    21 LMLGLDGAGKTTILYKL------KLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWK 79

  Fly    84 KYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTVIDLMG 148
            .|:.....|:||:||:|..|:.||:..|..:|...||.::.||:.:||:|...:.|.:.:..|:.
 Worm    80 YYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLD 144

  Fly   149 LYRLTGRDWTFEECSMRTGSGVQEIVNWINEKI 181
            |..|..|:|.....:..:|.|:.|.:.|:.:::
 Worm   145 LGSLKNREWFICGTNAHSGQGLYEGLMWVKKQM 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 49/160 (31%)
Ras 23..183 CDD:278499 49/163 (30%)
warf-1NP_501242.1 SAR 1..175 CDD:197556 49/159 (31%)
Arf_Arl 19..176 CDD:206644 49/160 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.