DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and Arfrp1

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_038960051.2 Gene:Arfrp1 / 117051 RGDID:621683 Length:282 Species:Rattus norvegicus


Alignment Length:177 Identity:57/177 - (32%)
Similarity:96/177 - (54%) Gaps:19/177 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFT---------INNFRVQLWDINGELK 77
            |:||||||||||:|..::....||...|  ...:|:.:.|         :...|:..||:.|:.:
  Rat   100 CILILGLDNAGKTTFLEQSKTRFNKNYK--GMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQEE 162

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .:.:|.|||.:.:.:|:|:||||..||||::.....|:..:.||..|:|:::||:|....||   
  Rat   163 LQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLS--- 224

  Fly   143 VIDLMGLY-----RLTGRDWTFEECSMRTGSGVQEIVNWINEKINNN 184
            :.|:...:     ::..||...:.||..||.||:|.:.|:.:.:..|
  Rat   225 IPDIKTAFSDCTCKIGRRDCLTQACSALTGKGVREGIEWMVKCVVRN 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 56/171 (33%)
Arfrp1XP_038960051.2 None

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