DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and ARL4C

DIOPT Version :9

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001269360.1 Gene:ARL4C / 10123 HGNCID:698 Length:201 Species:Homo sapiens


Alignment Length:175 Identity:53/175 - (30%)
Similarity:83/175 - (47%) Gaps:17/175 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSF----------TINNFRVQLWDINGELK 77
            :::||||:|||:|:..||.  ||    |..|.|....|          |........||:.|:.|
Human    16 IVMLGLDSAGKTTVLYRLK--FN----EFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEK 74

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .|.:|..|.:..:.:|:|:||.|..||.||:..|..|....|....|||:::||:|...||.::.
Human    75 LRPLWKSYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLPVAE 139

  Fly   143 VIDLMGLYRL-TGRDWTFEECSMRTGSGVQEIVNWINEKINNNRK 186
            :...:.|:.| ....:..:......|.|:.|.::.:.|.|...||
Human   140 IEKQLALHELIPATTYHVQPACAIIGEGLTEGMDKLYEMILKRRK 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 49/167 (29%)
Ras 23..183 CDD:278499 51/170 (30%)
ARL4CNP_001269360.1 Arl4_Arl7 11..192 CDD:206719 53/175 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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