DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and si:ch1073-165f9.2

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_002663882.2 Gene:si:ch1073-165f9.2 / 100333040 ZFINID:ZDB-GENE-141216-228 Length:181 Species:Danio rerio


Alignment Length:173 Identity:57/173 - (32%)
Similarity:91/173 - (52%) Gaps:21/173 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLILGLDNAGKSTLTD--RLAEI--------FNGESKESNNQVSEWSFTINNFRVQLWDINGELK 77
            ||:.|||.|||:|:..  :|.|:        ||.|:.|..|    .|||:       ||.:|:..
Zfish    20 LLMFGLDAAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKN----ISFTV-------WDFSGQTT 73

  Fly    78 NRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMST 142
            .:.:|..||.....||||:||:|..|:..|...|..:|...||.:|.||:::||:|...::....
Zfish    74 MKSLWRHYYSNTQGLIFVVDSSDRDRIETAAEELNLLLAEDELRDAVLLVLANKQDLPKAMLAQE 138

  Fly   143 VIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKINNNR 185
            :.|.:||:.||||.|..:......|||:.|..:|:.::::..:
Zfish   139 LTDRLGLHALTGRQWFVQSTCAVQGSGLYEGFDWLTDQLSKQQ 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 57/166 (34%)
si:ch1073-165f9.2XP_002663882.2 None

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