DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17819 and arl13b

DIOPT Version :10

Sequence 1:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001184084.1 Gene:arl13b / 100124913 XenbaseID:XB-GENE-1014460 Length:434 Species:Xenopus tropicalis


Alignment Length:176 Identity:52/176 - (29%)
Similarity:87/176 - (49%) Gaps:26/176 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QKSCLLILGLDNAGKSTLTDRLAEIFNGESKE--------SNNQVSEWSFTINNFRVQLWDINGE 75
            :|..|:::|||||||:.....:    .|||.|        |...:.:..|.|..|     |:.|.
 Frog    20 RKVTLVMVGLDNAGKTATVKGI----QGESPEDVAPTVGFSKADIKQGRFDITMF-----DLGGG 75

  Fly    76 LKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSM 140
            .:.|.||..||.:...::||:||:|..|:.|.:..:.:||.|..:...|:|:::||:|..|:||.
 Frog    76 KRIRGIWKNYYAESYGVVFVIDSSDVERMEETKETIAEVLRHPRISGKPVLVLANKQDREGALSE 140

  Fly   141 STVIDLMGLYRLTGRD---WTFEECSMRTGSG------VQEIVNWI 177
            :.:|:.:.|.:|....   ...|.||...|.|      ::..:||:
 Frog   141 ADIIEFLSLEKLVNEYKCLCQIEPCSAAIGHGKKIDKSIKNGLNWL 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 51/173 (29%)
arl13bNP_001184084.1 Arl2l1_Arl13_like 23..189 CDD:133361 51/173 (29%)

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