Protein Alignment lsn and VPS22

DIOPT Version :10

• Sequence 1: NP_650987.1
• Gene: lsn / 42572
• FlyBaseID: FBgn0260940
• Length: 254
• Species: Drosophila melanogaster
• Sequence 2: NP_194434.2
• Gene: VPS22 / 828812
• AraportID: AT4G27040
• Length: 250
• Species: Arabidopsis thaliana
• Alignment Length: 242
• Identity: 108/242 - (44%)
• Similarity: 151/242 - (62%)
• Gaps: 7/242 - (2%)

  Fly     1 MRRRVGLGAIQQQKLAAEKYKDKGTDLQENQLEQMTKQMEVFRVKLEEFAMKHKEDIRKNSQFRK 65
            ||||.|:|.:|:...|.::|:..|.::.:.:.:.|.:|:..||.:|||||.|||.|||||..||.
plant     1 MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLSTFRSQLEEFARKHKNDIRKNPAFRA 65

  Fly    66 QFQEMCAAIGVDPLATGKGFWS-VLGMGDFYYELGVQVVEVCLAANHKTGGLMELDDLRRRLIAA 129
            ||.||||.|||||||:.||||: :||:||||||||||::|||:......|||:.|.:|...|...
plant    66 QFHEMCANIGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSHNGGLISLQELCNHLRQR 130

  Fly   130 RGQSSVHQEITKEDILMAAKKLSIFGNGFVVHKLGKGKYIVQSIPGELSMEETNILNAASNTEQG 194
            |.:.  .:.:|::|.|.|..||.:.|:||.|..:|| |.:|:|:|.||:.:...||..|..  ||
plant   131 RKKD--REAVTEDDCLRAISKLKVLGSGFEVITIGK-KKLVRSVPTELNKDHNQILELAQG--QG 190

  Fly   195 CVTQSQLIKDLGWTDYRAQQSLDKVLGEGLCWIDKQAGD-EPAYWFP 240
            .|...::.:.|.||..|...:|:.:|.|||..||....| :..||||
plant   191 FVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYWFP 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lsn	NP_650987.1	EAP30	5..228	CDD:461201	97/223 (43%)
VPS22	NP_194434.2	EAP30	5..225	CDD:461201	98/224 (44%)