DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr93a and lite-1

DIOPT Version :10

Sequence 1:NP_524442.2 Gene:Gr93a / 42568 FlyBaseID:FBgn0041229 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:452 Identity:80/452 - (17%)
Similarity:162/452 - (35%) Gaps:161/452 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WLYRCARGLLVLSSSLDRDKLQLKATKQGSRNRFLH-------ILWRCIVVMIYAGLWPMLTSAV 80
            ||..|    |:|.::| |...|:.....|:|.....       ::..|..:::.:||...|....
 Worm    77 WLVFC----LLLFTTL-RKFNQVGVRPNGTRENLQEFFANPRSMITLCNALIMLSGLLASLQLYT 136

  Fly    81 IG-KRLESYADVLALAQSMSVSILAVISFVIQARGENQFREVLNRYLALYQRICLTTRLRHLFPT 144
            :| |||:            .:.||...|..::.:...:.:.::|.:||::..:            
 Worm   137 LGAKRLK------------PLKILCQFSLNVRTKQAERRQFMINTFLAVFSGL------------ 177

  Fly   145 KFVVFFLLKLFFTLCGCFHEIIPLFENSHFDDISQMVGTGFGIYMWLGT--------LCVLDACF 201
                     |..|:...:                .|...|:.:|: :||        .|||...:
 Worm   178 ---------LALTMAATY----------------AMSKWGYILYI-VGTPNLDTETIFCVLLDSY 216

  Fly   202 LGFL-------VSGILYEH---MANNIIAMLKRMEPIESQDERYRMTKYRRMQLLCDFADELDEC 256
            ..|:       ::.:.|:|   :..:|..::..|.|.|.                       |||
 Worm   217 ALFVSRAAISALAILFYQHCSVIRRSIKHLINEMVPAEQ-----------------------DEC 258

  Fly   257 AAIYSELYHVTN---SFRRILQWQ---------ILFYIYLNFINICLMLYQYILHF-LNDDEVVF 308
            ....|.|..:.:   |::||...:         :|||.|    .:|:.::.:::.. ::...:.:
 Worm   259 PLPESSLQKIHDCQISYQRIFNGKAVIEEYYSFVLFYSY----GVCIPIFCFLMFVGMSAQSICW 319

  Fly   309 VSIVMAFVKLANLVLLMMCADYTVRQSEVPKKLPLDIVCSDMD---------------ERWDKSV 358
            ..:|...:.:.|.:|:::..           .||..::..|.|               |..|.:|
 Worm   320 SEVVSIVIWIVNAILVLLLF-----------SLPAFMINEDGDRLVASSFRMYHETFHEERDLTV 373

  Fly   359 ET----FLGQLQTQRLEIKVLGFFHLNNEFILLILSAIISYLFILIQFGITGGFEASEDIKN 416
            .:    |..|:.:.:|.:....:|:::...:|.:.|||::|..||.:|          ||||
 Worm   374 LSQMTFFTFQIHSTKLTLSACNYFYMDRSILLSLFSAILTYFLILWEF----------DIKN 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr93aNP_524442.2 7tm_7 46..405 CDD:473258 68/416 (16%)
lite-1NP_509043.3 7tm_7 75..425 CDD:462463 78/450 (17%)

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