DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gr93a and lite-1

DIOPT Version :9

Sequence 1:NP_524442.2 Gene:Gr93a / 42568 FlyBaseID:FBgn0041229 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_509043.3 Gene:lite-1 / 180894 WormBaseID:WBGene00001803 Length:439 Species:Caenorhabditis elegans


Alignment Length:452 Identity:80/452 - (17%)
Similarity:162/452 - (35%) Gaps:161/452 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 WLYRCARGLLVLSSSLDRDKLQLKATKQGSRNRFLH-------ILWRCIVVMIYAGLWPMLTSAV 80
            ||..|    |:|.::| |...|:.....|:|.....       ::..|..:::.:||...|....
 Worm    77 WLVFC----LLLFTTL-RKFNQVGVRPNGTRENLQEFFANPRSMITLCNALIMLSGLLASLQLYT 136

  Fly    81 IG-KRLESYADVLALAQSMSVSILAVISFVIQARGENQFREVLNRYLALYQRICLTTRLRHLFPT 144
            :| |||:            .:.||...|..::.:...:.:.::|.:||::..:            
 Worm   137 LGAKRLK------------PLKILCQFSLNVRTKQAERRQFMINTFLAVFSGL------------ 177

  Fly   145 KFVVFFLLKLFFTLCGCFHEIIPLFENSHFDDISQMVGTGFGIYMWLGT--------LCVLDACF 201
                     |..|:...:                .|...|:.:|: :||        .|||...:
 Worm   178 ---------LALTMAATY----------------AMSKWGYILYI-VGTPNLDTETIFCVLLDSY 216

  Fly   202 LGFL-------VSGILYEH---MANNIIAMLKRMEPIESQDERYRMTKYRRMQLLCDFADELDEC 256
            ..|:       ::.:.|:|   :..:|..::..|.|.|.                       |||
 Worm   217 ALFVSRAAISALAILFYQHCSVIRRSIKHLINEMVPAEQ-----------------------DEC 258

  Fly   257 AAIYSELYHVTN---SFRRILQWQ---------ILFYIYLNFINICLMLYQYILHF-LNDDEVVF 308
            ....|.|..:.:   |::||...:         :|||.|    .:|:.::.:::.. ::...:.:
 Worm   259 PLPESSLQKIHDCQISYQRIFNGKAVIEEYYSFVLFYSY----GVCIPIFCFLMFVGMSAQSICW 319

  Fly   309 VSIVMAFVKLANLVLLMMCADYTVRQSEVPKKLPLDIVCSDMD---------------ERWDKSV 358
            ..:|...:.:.|.:|:::..           .||..::..|.|               |..|.:|
 Worm   320 SEVVSIVIWIVNAILVLLLF-----------SLPAFMINEDGDRLVASSFRMYHETFHEERDLTV 373

  Fly   359 ET----FLGQLQTQRLEIKVLGFFHLNNEFILLILSAIISYLFILIQFGITGGFEASEDIKN 416
            .:    |..|:.:.:|.:....:|:::...:|.:.|||::|..||.:|          ||||
 Worm   374 LSQMTFFTFQIHSTKLTLSACNYFYMDRSILLSLFSAILTYFLILWEF----------DIKN 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr93aNP_524442.2 7tm_7 46..405 CDD:303125 68/416 (16%)
lite-1NP_509043.3 7tm_7 75..425 CDD:285581 78/450 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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