DRSC/TRiP Functional Genomics Resources

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Protein Alignment CASK and sdt

DIOPT Version :9

Sequence 1:NP_001262811.1 Gene:CASK / 42567 FlyBaseID:FBgn0013759 Length:929 Species:Drosophila melanogaster
Sequence 2:NP_001033835.2 Gene:sdt / 44861 FlyBaseID:FBgn0261873 Length:2020 Species:Drosophila melanogaster


Alignment Length:912 Identity:228/912 - (25%)
Similarity:361/912 - (39%) Gaps:231/912 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 ACALLATVDNSA---PVKLGGFGSAIQLPGTRETIETHGR-VGCPHYMAPEVVTRRLYGKGCDVW 205
            |.|:....|..|   ..:|.|....:..|.....:|..|| |.|.  .||::..||..|.... .
  Fly  1186 AAAVSGVADGDARRVADELNGNAKPVPPPRDHLRVEKDGRLVNCS--PAPQLPDRRAPGNASS-G 1247

  Fly   206 GAGVMLHVL--------LSGRLPFLGSGVRLQQSVARGRLSFEAPEWKSISANAKDLVMKMLAAN 262
            .:|...|.|        :...|..|.|..:.|:.:.|.|...|                ::...|
  Fly  1248 SSGATTHPLQHQQIAQIVEPTLEQLDSIKKYQEQLRRRREEEE----------------RIAQQN 1296

  Fly   263 PHHRLSITEVLDHPWIRDRDKLQRTHLADTVEELKRYNARRKLKGAVQAIAGGTNMDPLYATDAD 327
            ...|.|         :|...||:.  |.||....|....:::.......:.|..|  ..|..|.|
  Fly  1297 EFLRNS---------LRGSRKLKA--LQDTATPGKAVAQQQQQATLATQVVGVEN--EAYLPDED 1348

  Fly   328 MPITGATDEWADEEAGIEAVQ-------------RILDCLDDIYSLQDAHVDADVLRDMLRDNRL 379
            .|.....|.:.:..|.:..:|             |:......:.|...|||.|            
  Fly  1349 QPQAEQIDGYGELIAALTRLQNQLSKSGLSTLAGRVSAAHSVLASASVAHVLA------------ 1401

  Fly   380 HQFLQLFDRIAATVVTSNGRAPAA-----EAVGRCRDVLEQLSSTSGGNSLGGKYAKEELMRLLA 439
                      |.|.|....|:..:     .::|..:|::|.|:.::...::       ||..||.
  Fly  1402 ----------ARTAVLQRRRSRVSGPLHHSSLGLQKDIVELLTQSNTAAAI-------ELGNLLT 1449

  Fly   440 APHMQALLHSHDVVARDVYGEEALRVTPPPMVPYLNGDELDNVEGGELQHV-------------- 490
            :..|:.||.:||.:|....|..:...||.|.:....|..|.:...|..:::              
  Fly  1450 SHEMEGLLLAHDRIANHTDGTPSPTPTPTPAIGAATGSTLSSPVAGPKRNLGMVVPPPVVPPPLA 1514

  Fly   491 ---------------------------------------------TRVRLVQFQKNTDEPMGITL 510
                                                         ..:|::|.:|:| ||:|.|:
  Fly  1515 QRGAMPLPRGESPPPVPMPPLATMPMSMPVNLPMSACFGTLNDQNDNIRIIQIEKST-EPLGATV 1578

  Fly   511 KMTEDGRCIVARIMHGGMIHRQATLHVGDEIREINGQPVQHQSVGQLQRMLREARGSVTFKIVPS 575
            : .|....::.||:.||...:...||.||||.|:|||.::.::|.::..:|...:|::||.|||:
  Fly  1579 R-NEGEAVVIGRIVRGGAAEKSGLLHEGDEILEVNGQELRGKTVNEVCALLGAMQGTLTFLIVPA 1642

  Fly   576 YRSAPPPCEIF----------------------VRAQFDYNPLDDELIPCAQAGISFQVGDILQI 618
              .:||...:.                      |||.|||:|.||..|||.:.|||||.||:|.:
  Fly  1643 --GSPPSVGVMGGTTGSQLAGLGGAHRDTAVLHVRAHFDYDPEDDLYIPCRELGISFQKGDVLHV 1705

  Fly   619 ISKDDHHWWQARLD-----TVGGSAGLIPSPELQEWRIACQTVDKTKQEQVN------------- 665
            ||::|.:||||..:     |:   ||||||...|..|   :|:.....|:..             
  Fly  1706 ISREDPNWWQAYREGEEDQTL---AGLIPSQSFQHQR---ETMKLAIAEEAGLARSRGKDGSGSK 1764

  Fly   666 -----CSIFGRKKKQCRDK------YLAKHNAIFDTLDVVTYEEVVKVPVGDPNFQRKT----LV 715
                 |:..|||||:....      |........|..:::|||||...      :.|.|    :|
  Fly  1765 GATLLCARKGRKKKKKASSEAGYPLYATTAPDETDPEEILTYEEVALY------YPRATHKRPIV 1823

  Fly   716 LLGAHGVGRRHIKNTLISKYPDKYAYPIPHTTRPAKPEEENGRSYYFVSHDEMMADIGANEYLEY 780
            |:|...:||..::..|::. .::::..:|||:|..:..|..|..|:|::.....|||.|..::|:
  Fly  1824 LIGPPNIGRHELRQRLMAD-SERFSAAVPHTSRARREGEVPGVDYHFITRQAFEADILARRFVEH 1887

  Fly   781 GTHEDAMYGTKLDTIRRIHTEGKMAILDVEPQALKILRTAEFTPYVVFIAAPSLQNIADYDGSLE 845
            |.:|.|.|||.|:.||.:...||:.:|::.||:||:||.::..||||.:|.|||..:........
  Fly  1888 GEYEKAYYGTSLEAIRTVVASGKICVLNLHPQSLKLLRASDLKPYVVLVAPPSLDKLRQKKLRNG 1952

  Fly   846 RLAKESEM---------LRQLYGHFFDLTIVNNDISETIATLETAIDRVHTTPQWVPVSWLYXQD 901
            ...||.|:         :...:||.||:.|:|||.......|...|:.:...|||||..|::...
  Fly  1953 EPFKEEELKDIIATARDMEARWGHLFDMIIINNDTERAYHQLLAEINSLEREPQWVPAQWVHNNR 2017

  Fly   902 SE 903
            .|
  Fly  2018 DE 2019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASKNP_001262811.1 STKc_CASK 8..308 CDD:270996 37/174 (21%)
S_TKc 12..278 CDD:214567 30/144 (21%)
L27 347..396 CDD:280918 10/61 (16%)
L27 406..462 CDD:280918 15/55 (27%)
PDZ_signaling 493..573 CDD:238492 28/79 (35%)
SH3_CASK 586..646 CDD:213014 34/86 (40%)
Guanylate_kin 710..883 CDD:279019 59/185 (32%)
GuKc 720..883 CDD:214504 54/171 (32%)
sdtNP_001033835.2 PDZ_signaling <54..102 CDD:238492
L27 1423..1466 CDD:295425 14/49 (29%)
PDZ_signaling 1562..1640 CDD:238492 28/79 (35%)
SH3_MPP5 1673..1734 CDD:212969 34/63 (54%)
Guanylate_kin 1820..1994 CDD:279019 56/174 (32%)
GuKc 1831..2002 CDD:214504 55/171 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468174
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23122
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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