DRSC/TRiP Functional Genomics Resources

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Protein Alignment CASK and CaMKII

DIOPT Version :9

Sequence 1:NP_001262811.1 Gene:CASK / 42567 FlyBaseID:FBgn0013759 Length:929 Species:Drosophila melanogaster
Sequence 2:NP_001162833.1 Gene:CaMKII / 43828 FlyBaseID:FBgn0264607 Length:531 Species:Drosophila melanogaster


Alignment Length:589 Identity:175/589 - (29%)
Similarity:275/589 - (46%) Gaps:91/589 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FDDVYELCEVIGKGPFSIVRRCIHRESNQQFAVKIVDVAKFTASPGLSTADLKREATICHMLKHP 72
            |.|.|::.|.:|||.||||:||:.:.:..:||.||::..|.||.   ....|:|||.||..|.||
  Fly    10 FSDNYDIKEELGKGAFSIVKRCVQKSTGFEFAAKIINTKKLTAR---DFQKLEREARICRKLHHP 71

  Fly    73 HIVELLETYSSEGMLYMVFEFMEGSDLCFEVVRRAVAGFVYSEAVACHYMRQILEALRYCHENDI 137
            :||.|.::...|...|:||:.:.|.:|..::|.|.    .||||.|.|.::||||::.:||:|.:
  Fly    72 NIVRLHDSIQEENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHQNGV 132

  Fly   138 LHRDVRPACALLATVDNSAPVKLGGFGSAIQLPGTRETIETHGRVGCPHYMAPEVVTRRLYGKGC 202
            :|||::|...|||:....|.|||..||.||::.|..:.  ..|..|.|.|::|||:.:..|||..
  Fly   133 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGDHQA--WFGFAGTPGYLSPEVLKKEPYGKSV 195

  Fly   203 DVWGAGVMLHVLLSGRLPFLGSGV-RLQQSVARGRLSFEAPEWKSISANAKDLVMKMLAANPHHR 266
            |:|..||:|::||.|..||..... ||...:..|...:.:|||.:::..||:|:.:||..||:.|
  Fly   196 DIWACGVILYILLVGYPPFWDEDQHRLYSQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPNKR 260

  Fly   267 LSITEVLDHPWIRDRDKLQR-THLADTVEELKRYNARRKLKGAVQAIAGGTNMDPLYAT---DAD 327
            ::..|.|.||||..|:::.. .|..:||:.||::|||||||||:        :..:.||   .:.
  Fly   261 ITAAEALKHPWICQRERVASVVHRQETVDCLKKFNARRKLKGAI--------LTTMLATRNFSSR 317

  Fly   328 MPITGATDEWADEEAGIEAVQRILDCLDDIYSLQDAHVD--ADVLRDMLRDNRLHQFLQLFDRIA 390
            ..||...:....:|:...:...:.|  |||...:...||  ..|:.....|.|:     |..  |
  Fly   318 SMITKKGEGSQVKESTDSSSTTLED--DDIKEDKKGTVDRSTTVVSKEPEDIRI-----LCP--A 373

  Fly   391 ATVVTSNGRAPAAEAVGRCR--DVLEQLSSTSGGNSLGGKYAKEELMRLLAAPHMQAL------- 446
            .|...:.|.:..:.|..|..  .:.|||..........| |.|      :..||:.|.       
  Fly   374 KTYQQNIGNSQCSSAARRQEIIKITEQLIEAINSGDFDG-YTK------ICDPHLTAFEPEALGN 431

  Fly   447 ----LHSHDVVARDVYGEEALRVTPPPMVPYLNGDELDNVEGGELQHVTRVRLVQFQKNTDEPMG 507
                :..|.....:|.|:....:....:.|::      ::.|.|...:..|||.|:         
  Fly   432 LVEGIDFHKFYFENVLGKNCKAINTTILNPHV------HLLGEEAACIAYVRLTQY--------- 481

  Fly   508 ITLKMTEDGRCIVARIMHGGMIHRQ--ATLHVGDEIREINGQPVQHQSVGQLQRMLREARGSVTF 570
                                 |.:|  |..|..:|.|..:.:..:.|:|...:....:..|:.||
  Fly   482 ---------------------IDKQGHAHTHQSEETRVWHKRDNKWQNVHFHRSASAKISGATTF 525

  Fly   571 KIVP 574
            ..:|
  Fly   526 DFIP 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASKNP_001262811.1 STKc_CASK 8..308 CDD:270996 122/301 (41%)
S_TKc 12..278 CDD:214567 105/266 (39%)
L27 347..396 CDD:280918 12/50 (24%)
L27 406..462 CDD:280918 13/68 (19%)
PDZ_signaling 493..573 CDD:238492 15/81 (19%)
SH3_CASK 586..646 CDD:213014
Guanylate_kin 710..883 CDD:279019
GuKc 720..883 CDD:214504
CaMKIINP_001162833.1 STKc_CaMKII 12..303 CDD:270988 121/299 (40%)
S_TKc 14..272 CDD:214567 105/266 (39%)
CaMKII_AD 390..517 CDD:285524 28/169 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0033
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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