DRSC/TRiP Functional Genomics Resources

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Protein Alignment CASK and Lrguk

DIOPT Version :9

Sequence 1:NP_001262811.1 Gene:CASK / 42567 FlyBaseID:FBgn0013759 Length:929 Species:Drosophila melanogaster
Sequence 2:XP_017448017.1 Gene:Lrguk / 296968 RGDID:1308226 Length:1271 Species:Rattus norvegicus


Alignment Length:758 Identity:142/758 - (18%)
Similarity:265/758 - (34%) Gaps:255/758 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 PFLGSGVRLQQSVARGR--------LSFEAPE--W---------KSISANAKDLVMKMLAANPHH 265
            |....|.|.|:|:...|        |:.:.|:  |         |....:|...::..|.    |
  Rat     8 PSRWKGTRFQRSLGASRAVAQAILSLTDKEPQKRWPTFPMGLRSKGTFRSASSYLLHQLI----H 68

  Fly   266 RLSITEVLDHPWIRDRDKLQRTHLADTVEELKRYNARRKLKGAVQAIAGGTNMDPLYATDADMPI 330
            |....||       ::::.|....::..||.:..|...:..|.::                :..:
  Rat    69 RSHEAEV-------EQEEQQEEGESEESEESEMQNLEDEYDGVLR----------------EENV 110

  Fly   331 TGATDEWADEEAGIEAVQRILD---C-------LDDIYSLQDAHVDADVLRDM------------ 373
            ..|.|.......|.|.|.|.|:   |       |.....||..::..:.:.|:            
  Rat   111 ADALDGLGWSGRGTEQVYRNLNLSHCELIDVSILSGYVHLQKLNLSGNRIEDLSCVSCMPYLLEL 175

  Fly   374 -LRDNRLHQFLQLFDRIAATVVTSNGRAPAAEAVGRCRDVLEQLSSTSGGNSLGGKYAKEELMRL 437
             ...|||..|.             |.:.|        :::.:::..:|  |.:...|.       
  Rat   176 NASQNRLTTFF-------------NFKPP--------QNLKQKVDFSS--NQISEMYD------- 210

  Fly   438 LAAPH--MQALLHSHDVVARDVYG-EEALRVTPPPMVPYLNGDELDNVEG-GELQHVTRVRLVQF 498
            |:|.|  .|.:|.::::  .::.| |:.:.:|...    |.|:.:..::| |.|.    ::::..
  Rat   211 LSAYHTLTQLILDNNEI--EEITGLEKCISLTHLS----LAGNRITTIKGLGTLP----IKVLSV 265

  Fly   499 QKNTDEPMGITLKMTEDGRCIVARIMHGGMIHRQ-ATLHVG----DEIREINGQPVQHQSVGQLQ 558
            ..|..|    |:...|:    :..:.:..:.|.| ::|| |    |.:..||.:..:.:.:.:::
  Rat   266 SNNQIE----TITGLEE----LKALQNLDLSHNQISSLH-GLENHDLLEVINLEDNKIKELSEIE 321

  Fly   559 --------RMLREARGSVTFKIVPSYRSAPPPCEIFVRAQFDYNPLDDELIPCAQAGISFQVGDI 615
                    |:|...|..:..|  |.|..    ..||:..:.  ..||.:.|         :|.:.
  Rat   322 YIENLPILRVLNLLRNPIQTK--PEYWF----FVIFMLLRL--TELDQQKI---------KVEEK 369

  Fly   616 LQIISKDDHHWWQARLDTVGGSAGLIPSPELQEWRIACQ-----TVDKTKQEQVNCSIFGRKKKQ 675
            :..::|.|                  |.||:    :|.|     .|:...|.|            
  Rat   370 VYAVNKYD------------------PPPEV----VAAQDHMTHVVNSMSQPQ------------ 400

  Fly   676 CRDKYLAKHNAIFDTLDVVTYEEVVKVPVGDPNFQRKTLVLLGAHGVGRRHIKNTLISKYPDKYA 740
                      .|||:          .:|..|..:  ..|:|.|....|:|.:.:.|..::...:.
  Rat   401 ----------RIFDS----------TLPSLDAPY--PMLILTGPEACGKRELAHRLCRQFSTYFR 443

  Fly   741 YPIPHTTRPAKPEEENGRSYYFVSH---DEMMADIGANEYL---EYGTHEDAMYGTKLDTIRRIH 799
            |...|||||....|.:...|:|||.   |||::   ..:::   .||.|.   ||...||:..|.
  Rat   444 YGACHTTRPPYFGEGDRVDYHFVSQEVFDEMLS---MGKFILTFNYGNHN---YGLNRDTVEGIA 502

  Fly   800 TEGKMAILDVEPQALKILRTAEFTPYVVFIAAPSLQNIADYDGSLER--LAKESEM--------- 853
            .:|..:.:.:|.:.::.|:.:.|.|..:.:.....:.   |:|.|.|  |...:|:         
  Rat   503 RDGLASCIHMELEGIRSLKYSYFEPRYILVVPMDKEK---YEGYLRRKGLFSRAEIEIAVSRVDL 564

  Fly   854 ---LRQLYGHFFDLTIVNND------------ISETIATLETA 881
               :.:.:..:|| .::|.|            |.|.:...|||
  Rat   565 YVKVNRKFPGYFD-AVINADDLDIAYQKLSELIREYLGLTETA 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASKNP_001262811.1 STKc_CASK 8..308 CDD:270996 20/106 (19%)
S_TKc 12..278 CDD:214567 16/76 (21%)
L27 347..396 CDD:280918 12/71 (17%)
L27 406..462 CDD:280918 10/58 (17%)
PDZ_signaling 493..573 CDD:238492 16/92 (17%)
SH3_CASK 586..646 CDD:213014 9/59 (15%)
Guanylate_kin 710..883 CDD:279019 48/204 (24%)
GuKc 720..883 CDD:214504 45/194 (23%)
LrgukXP_017448017.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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