DRSC/TRiP Functional Genomics Resources

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Protein Alignment CASK and magu-3

DIOPT Version :9

Sequence 1:NP_001262811.1 Gene:CASK / 42567 FlyBaseID:FBgn0013759 Length:929 Species:Drosophila melanogaster
Sequence 2:NP_491260.2 Gene:magu-3 / 183676 WormBaseID:WBGene00016841 Length:479 Species:Caenorhabditis elegans


Alignment Length:561 Identity:139/561 - (24%)
Similarity:218/561 - (38%) Gaps:129/561 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 LRDNR------LHQFLQLFDRIAATVVTSNGRAPAAEAVGRCRDVLEQLSSTSGGNSLGGKYAKE 432
            ||.|.      ||..|:..:.|.    ..||:...|:            |:.|.|.|...|..||
 Worm    10 LRSNAENLSRCLHVLLEKIENIE----KKNGKEQDAD------------STKSNGTSSSNKDGKE 58

  Fly   433 ELMRLLAAPHMQ---------ALLHSHDVVARDVYGEEALRVTPPPMVPYLNGDELDNVEGGELQ 488
            :..::......:         ..:.:..|:....:...||....|.|.|.|......|.....: 
 Worm    59 KFEQVEIEEKTEIDPKTGLKKRTIVTERVLTTKTFHALALDGPSPTMTPILRSSGTKNHNYAPI- 122

  Fly   489 HVTRVRLVQFQKNTDEPMGITLKMTED-GRCIVARI-MHGGM-----IHRQAT--LHVGDEIREI 544
            |.:.:.|.|:|..         |.|.| |:.....: .|||.     |:.::.  |..||.|.::
 Worm   123 HQSAILLPQYQSR---------KTTVDAGQLTQVEVEKHGGQLVVTKINEKSNYDLKPGDVITQV 178

  Fly   545 NGQPVQHQSVGQLQRMLREARGSVTFKIVPS-YRSAPPPCEIFVRAQFDYNPLDDELIPCAQAGI 608
            :|:.|..::      .:...:|.|...:.|: ...||..   |.|.|..|:...|...||....:
 Worm   179 DGKDVYFRA------DIENLKGKVELTVEPAGIHCAPAN---FHRVQDTYSSHIDVDRPCLWLDL 234

  Fly   609 SFQVGDILQIISKDDHHWWQARLDTVGG--SAGLIPSPELQEWRIACQTVDKTKQEQVNCSIFGR 671
            ....||::||:|||: .|.|.|  .:|.  ..|.:|:.                           
 Worm   235 EVNPGDVIQILSKDE-KWMQVR--KLGDLTQVGYLPTS--------------------------- 269

  Fly   672 KKKQCRDKYLAKHNAIFDTLDVVTYEEV-VKVPVGDPNFQRKTLVLLGAHGVGRRHIKNTLISKY 735
                                  :|.|:| :..|.|     |:|||||||.|.|||.||:.|:...
 Worm   270 ----------------------LTMEKVSMLCPFG-----RRTLVLLGAVGTGRRDIKSMLLRLA 307

  Fly   736 PDKYAYPIPHTTRPAKPEEENGRSYYFVSHDEMMADIGANEYLEYGTHEDAMYGTKLDTIRRIHT 800
            |..::..:|.|:|..:|.|..||.|.||..:|:...|.....:|:|..:..:|||..|::|....
 Worm   308 PHYFSTIVPLTSRAQRPGEVEGREYQFVRKEEIYQKIREGGMVEWGELDSQLYGTSADSVRNEIR 372

  Fly   801 EGKMAILDVEPQALKILRTAEFTPYVVFIAAPSLQNIADYD---------GSLERLAKESEMLRQ 856
            .|:|.:||..||::..|..|||.|:||.:..|.::.....:         |.|:.:..||..:..
 Worm   373 SGRMCVLDAAPQSVNYLYNAEFMPFVVHVVPPPIEEFTQLEAVRRTHRTQGQLQSICDESAKIGL 437

  Fly   857 LYGHFFDLTIVNNDISETIATLETAIDRVHTTPQWVPVSWL 897
            .......||:||.:|..|...|..:::.:....||||.||:
 Worm   438 ECKSKIHLTLVNRNIDVTFKRLVDSLETLRYETQWVPHSWM 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASKNP_001262811.1 STKc_CASK 8..308 CDD:270996
S_TKc 12..278 CDD:214567
L27 347..396 CDD:280918 7/27 (26%)
L27 406..462 CDD:280918 8/64 (13%)
PDZ_signaling 493..573 CDD:238492 19/88 (22%)
SH3_CASK 586..646 CDD:213014 20/61 (33%)
Guanylate_kin 710..883 CDD:279019 60/181 (33%)
GuKc 720..883 CDD:214504 52/171 (30%)
magu-3NP_491260.2 PDZ 147..204 CDD:381812 13/62 (21%)
SH3 218..268 CDD:388381 16/52 (31%)
Guanylate_kin 282..464 CDD:366206 61/186 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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