DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CASK and Card10

DIOPT Version :9

Sequence 1:NP_001262811.1 Gene:CASK / 42567 FlyBaseID:FBgn0013759 Length:929 Species:Drosophila melanogaster
Sequence 2:XP_036014949.1 Gene:Card10 / 105844 MGIID:2146012 Length:1144 Species:Mus musculus


Alignment Length:449 Identity:102/449 - (22%)
Similarity:152/449 - (33%) Gaps:138/449 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 LYGKGCDVWGAGVMLHVLLSGRLP-------------FLGSGVRLQQSVARGRLSFEAP-----E 243
            |..:||.:......|.:.:||..|             ..|.|.|...:|.|..||  .|     |
Mouse   698 LLARGCGLDFLNRSLAIRVSGWSPPAGLDPQDKSPDSMPGLGDRWSGAVVRRVLS--GPGSARTE 760

  Fly   244 WKSISANAKDLVMKMLAANPHHRLSITEVLDHPWIRDRDKLQRTHLADTVEELKRYNARRKLKGA 308
            .|...|....|....|.|....|..       ||          :.:.|:..|....|......|
Mouse   761 QKEPRAEGTGLEGAGLEAEAQQRTL-------PW----------NQSSTLPFLLDSKACHSFHEA 808

  Fly   309 VQAIAGGTNMDPLY-ATDADMPITGATDEWADEEAGIEAVQRILDCLDDIYSLQD----AHVDAD 368
            :.|.|.|...:|.| ..:..:|      |.:|..|.....|.||..:|..:..:.    ..||..
Mouse   809 LDAWAKGPGAEPFYIRANFSLP------ERSDPHALCVKAQEILRLVDPAHKRRQEWFCTRVDTL 867

  Fly   369 VLRDMLRD-----NRLHQFLQLFDRIAATVVTSNGRAPAA----EAVGRCRDVLEQLSSTSGGNS 424
            .|||:.|.     .|..|.|::.::.   :::|..|:|.:    .|:|..|      ...:||.:
Mouse   868 TLRDLDRGTVPNYQRAQQLLEVQEKY---LISSRHRSPRSNLKKRALGLVR------PKPAGGTA 923

  Fly   425 LGGKYAKE-------ELMRLLAAPH--MQALLHSHDVVARDVYGEEALR---VTPPPMVPYLNGD 477
              |..|::       ||.|.| .|:  ::.||.|            |||   :.|..:.|.|..:
Mouse   924 --GDSAEQLPAEPCSELERSL-KPYSLVRPLLVS------------ALRPVVLLPECLAPRLIRN 973

  Fly   478 ELD-------------NVEGGELQHV-----------------TRVRLVQFQKNTDEPMGITLKM 512
            .||             ....||.|..                 :|:|.:|      |.:|....:
Mouse   974 LLDLPSSRLDFQVCPAESLSGEEQCTSSAPGAPKAWPATAGLGSRIRAIQ------ESVGKKHCL 1032

  Fly   513 TEDGRCIVARIMHGG----MIHRQATLHVGDEIREINGQPVQHQSVGQLQRMLREARGS 567
            .|.|...|..::|..    :||.:.|.....|||.:.|:|....|     .:||:.|||
Mouse  1033 LELGARGVRELVHSEVYPIVIHVEVTEKNVREIRGLLGRPGWRDS-----ELLRQCRGS 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASKNP_001262811.1 STKc_CASK 8..308 CDD:270996 27/128 (21%)
S_TKc 12..278 CDD:214567 23/98 (23%)
L27 347..396 CDD:280918 13/57 (23%)
L27 406..462 CDD:280918 14/64 (22%)
PDZ_signaling 493..573 CDD:238492 22/79 (28%)
SH3_CASK 586..646 CDD:213014
Guanylate_kin 710..883 CDD:279019
GuKc 720..883 CDD:214504
Card10XP_036014949.1 CARD_CARD10_CARMA3 150..235 CDD:260069
Smc <270..>573 CDD:224117
SH3 822..884 CDD:418401 16/67 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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