DRSC/TRiP Functional Genomics Resources

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Protein Alignment CASK and pals1b

DIOPT Version :10

Sequence 1:NP_001262811.1 Gene:CASK / 42567 FlyBaseID:FBgn0013759 Length:929 Species:Drosophila melanogaster
Sequence 2:NP_001171218.2 Gene:pals1b / 100422734 ZFINID:ZDB-GENE-060531-2 Length:639 Species:Danio rerio


Alignment Length:612 Identity:181/612 - (29%)
Similarity:305/612 - (49%) Gaps:89/612 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 MPITGATDEWADEEAGIEAVQRILDCLDDIYSL---QDAHVDADVLRDMLRDNRLHQ-FLQLFDR 388
            |.||    |.:.||.....:..:|.||..::..   :::..|.::|.|:|......| |:     
Zfish    72 MNIT----EASSEEKSTTDLDSVLQCLHHLHQCVLDEESQQDVELLLDLLLQTNFQQAFI----- 127

  Fly   389 IAATVVTSNGR---------APAAEAVGRCRDVLEQLSSTSGGNSLGGKYAKEELMRLLAAPHMQ 444
            :..:|.....|         |.|.:..|:...||:....|..          .||..||.:||:|
Zfish   128 MQRSVAQGMSRLCPPPYPLTAHAQQLRGQVESVLQSSKHTEA----------TELTGLLTSPHLQ 182

  Fly   445 ALLHSHDVVARDVYGEEALRVTPPPMVPYLNGDELDNVEGGELQHVTRVRLVQFQKNTDEPMGIT 509
            ||:.:||.:|     |:.|              ::|.:|..:....| .:||..:|..|.|:|:|
Zfish   183 ALMEAHDCIA-----EQEL--------------DVDTIEAVDQDEKT-TKLVSLEKIRDIPLGVT 227

  Fly   510 LKMTEDGRCIV-ARIMHGGMIHRQATLHVGDEIREINGQPVQHQSVGQLQRMLREARGSVTFKIV 573
            ::..:|  |:| :|::.||...:...|..||||.|||..||:.::|..:..:|....||:||.::
Zfish   228 VRNEQD--CVVISRVVSGGTAEKSNLLSEGDEILEINNIPVRGKTVNDVHDLLSSMYGSLTFLLI 290

  Fly   574 PSYRSAPP---PCEIFVRAQFDYNPLDDELIPCAQAGISFQVGDILQIISKDDHHWWQARL---D 632
            |:..:..|   |..:.|:|.|.|:|.:|..:||.:.|:|||.||||.:.|:||.:||||..   |
Zfish   291 PNSHNKLPLDRPTVMHVKANFSYDPSEDPYVPCKELGLSFQRGDILHVTSQDDPNWWQAYREGHD 355

  Fly   633 TVGGSAGLIPSPELQEWRIACQTVDKTKQEQVN----CSIFGRKKKQCRDKYLAKHNAIFD--TL 691
            .....|||||....|:.|.|.:.....|.|:..    |:|  |.||. |.|.|...|...:  :.
Zfish   356 DQKPLAGLIPGKNFQQHREAMKKTITDKNEEYKGKLWCAI--RSKKH-RKKLLYNPNKNIEHYSE 417

  Fly   692 DVVTYEEVVKVPVGDPNFQRKTLVLLGAHGVGRRHIKNTLISKYPDKYAYPIPHTTRPAKPEEEN 756
            |::|||||..  ...|..:::.:.|:|....|:..::..|:|..|:::|..:|||||..:..|.|
Zfish   418 DILTYEEVSL--YRQPPDRKRPVALIGPANSGQDELRQRLLSSEPERFAAAVPHTTRSPRVHEVN 480

  Fly   757 GRSYYFVSHDEMMADIGANEYLEYGTHEDAMYGTKLDTIRRIHTEGKMAILDVEPQALKILRTAE 821
            ||.|.|||.....:::.|.:::|.|.:.:.:|||..|::|::...||:.:|.::|::|::|.:::
Zfish   481 GREYNFVSRQSFESELSAGKFIESGEYGNNLYGTNADSVRQVVNSGKICLLCLQPRSLQVLCSSD 545

  Fly   822 FTPYVVFI--AAPSLQNIADYD--------GSLERLAKE----SEMLRQL---YGHFFDLTIVNN 869
            ..||::||  :.|.|......:        |..:|:.::    .|..|::   |||.||..|.||
Zfish   546 LKPYIIFIRPSPPPLSPPPPQERFSTMLARGVKKRMPEDVREMMEKAREMEDSYGHLFDTFITNN 610

  Fly   870 DISETIATLETAIDRVHTTPQWVPVSW 896
            :..:::..|.:.|.::...|||:|.:|
Zfish   611 EPEKSVCELLSIIQKLDNEPQWIPSAW 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASKNP_001262811.1 STKc_CASK 8..308 CDD:270996
L27 347..396 CDD:460717 10/52 (19%)
L27 406..462 CDD:460717 17/55 (31%)
PDZ_CASK-like 494..574 CDD:467267 29/80 (36%)
SH3_CASK 586..646 CDD:213014 29/62 (47%)
Guanylate_kin 710..883 CDD:395500 53/189 (28%)
pals1bNP_001171218.2 L27_N 86..133 CDD:462666 9/51 (18%)
L27 156..197 CDD:197794 17/69 (25%)
PDZ_MPP5-like 212..291 CDD:467259 29/80 (36%)
SH3_MPP5 306..367 CDD:212969 29/60 (48%)
Guanylate_kin 434..626 CDD:395500 54/191 (28%)
Blue background indicates that the domain is not in the aligned region.

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