DRSC/TRiP Functional Genomics Resources

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Protein Alignment CASK and pals1

DIOPT Version :9

Sequence 1:NP_001262811.1 Gene:CASK / 42567 FlyBaseID:FBgn0013759 Length:929 Species:Drosophila melanogaster
Sequence 2:XP_002937246.1 Gene:pals1 / 100145156 XenbaseID:XB-GENE-978290 Length:675 Species:Xenopus tropicalis


Alignment Length:684 Identity:218/684 - (31%)
Similarity:350/684 - (51%) Gaps:88/684 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 PHHRLSITEVLDHPW--------IRDRDKLQRTHLADTVEELKRYNARRKLKGAVQAIAGGTNM- 318
            |.||   ...:|.|.        ||...:|:|  :....|:::|   ||:.:|..|.:...::| 
 Frog    30 PKHR---EMAVDCPGDLGTRAMPIRRSAQLER--IRQQQEDMRR---RREEEGKKQDLDVNSSMR 86

  Fly   319 -----DPLYATDADMPITGATDEWADEEAGIEAVQRILDCLDDIYSLQDAH---VDADVLRDMLR 375
                 .....|..|.||.. |||....|:...|| ::|:..|.|.||:|..   ||:....|:..
 Frog    87 LKKLAQIFPKTGIDNPIFD-TDESLVLESPSRAV-KVLEIEDLISSLKDIQHTLVDSQSQEDISV 149

  Fly   376 DNRLHQ---FLQLFDRIAATVVTSNGRAPAAEAVGRCRDVLEQLSSTSGGNSLGGKYAKE--ELM 435
            ..:|.|   |...|....|..|..|..:|....|...:|:.:::...     |...:.||  ||.
 Frog   150 LLQLAQNVDFQNAFKIHNAVAVHMNKTSPPYPLVPNAQDLTQEVQQV-----LKSSHQKEGQELS 209

  Fly   436 RLLAAPHMQALLHSHDVVARDVYGEEALRVTPPPMVPY------LNGDELDNVEGGELQHVTRVR 494
            .||..||:||||.:||.||      |...:..|....|      |.|||             .|:
 Frog   210 ALLNTPHIQALLLAHDKVA------EQEMMPEPASDDYFYENIGLYGDE-------------TVK 255

  Fly   495 LVQFQKNTDEPMGITLKMTEDGRCIVARIMHGGMIHRQATLHVGDEIREINGQPVQHQSVGQLQR 559
            :|:.:|..|.|:|.|::...|. .|::||:.||...:...||.||||.:|||..::.:.|.::..
 Frog   256 IVRIEKARDIPLGATVRNDGDS-VIISRIVKGGAAEKSGLLHEGDEILQINGMEIRGKDVNEVFE 319

  Fly   560 MLREARGSVTFKIVPSYRSAPPPCE---IFVRAQFDYNPLDDELIPCAQAGISFQVGDILQIISK 621
            :|.:..|:::|.::|..:|.|||.:   :.|:|.|||:|.||..:||.:.|:|||.||||.:||:
 Frog   320 LLADMHGNLSFLLIPGQQSKPPPSKETVVHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQ 384

  Fly   622 DDHHWWQARLDTVGGS-----AGLIPSPELQEWRIAC-QTVDKTKQEQVNCSIF-GRKKKQCRDK 679
            :|.:||||..|  |..     |||:|....|:.|.|. ||:::.|:.:.:..:: .:|.|:.|.|
 Frog   385 EDPNWWQAYRD--GDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKK 447

  Fly   680 --YLAKHNAIFDTLDVVTYEEVVKVPVGDPNFQRKTLVLLGAHGVGRRHIKNTLISKYPDKYAYP 742
              |.|..|..:|..:::||||:..  ...|..:::.::|:|....|:..::..|::..|:::|..
 Frog   448 VLYNANKNDDYDNEEILTYEEMSL--YHQPANRKRPIILIGPQSCGQNELRQRLMTNEPERFAAA 510

  Fly   743 IPHTTRPAKPEEENGRSYYFVSHDEMMADIGANEYLEYGTHEDAMYGTKLDTIRRIHTEGKMAIL 807
            :|||||..:..|..||.|:|||.....|||.|.:::|:|..|..:|||.:|::|::....|:.:|
 Frog   511 VPHTTRSRRENELAGRDYHFVSRQTFDADISAGKFIEFGEFEKNLYGTSIDSVRQVINSSKICLL 575

  Fly   808 DVEPQALKILRTAEFTPYVVFIAAPS---LQNIADYDG------SLERLAKESEMLRQLYGHFFD 863
            .:..|:||:||.::..||::|||.||   |:.:...:|      .|..:.:::..:.|..|||||
 Frog   576 CLHTQSLKMLRNSDLKPYIIFIAPPSQERLRALLAKEGRNPKPEELREIIEKAREMEQNNGHFFD 640

  Fly   864 LTIVNNDISETIATLETAIDRVHTTPQWVPVSWL 897
            ..|||.|:.:....|...|:::.|.|||||.|||
 Frog   641 TAIVNTDLDKAYQELLRLINKLDTEPQWVPSSWL 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASKNP_001262811.1 STKc_CASK 8..308 CDD:270996 13/52 (25%)
S_TKc 12..278 CDD:214567 5/22 (23%)
L27 347..396 CDD:280918 16/54 (30%)
L27 406..462 CDD:280918 19/57 (33%)
PDZ_signaling 493..573 CDD:238492 26/79 (33%)
SH3_CASK 586..646 CDD:213014 31/64 (48%)
Guanylate_kin 710..883 CDD:279019 58/181 (32%)
GuKc 720..883 CDD:214504 56/171 (33%)
pals1XP_002937246.1 L27_N 123..170 CDD:370269 13/46 (28%)
L27 186..236 CDD:367207 19/60 (32%)
PDZ_signaling 254..333 CDD:238492 26/79 (33%)
SH3_MPP5 349..411 CDD:212969 31/63 (49%)
GuKc 491..661 CDD:214504 57/169 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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